Thursday March 21st 2024 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

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About this webinar

In this webinar you will learn about:

• RNA Isolation, rRNA Depletion, QC

• Library prep & sequencing

• Bar coding using unique sequences

• Pooling & Sequencing

• Data Processing & Trimming

• Read Alignment vs pseudo-alignment

• Transcriptome Analysis techniques such as

  • Clustering: Distance and Linkage choices

  • Differential Gene Analysis (DGE): DESeq2, EdgeR, Limma

  • Gene Set Enrichment Analysis (GSEA)

• Transcriptome and Metatranscriptome Assembly

• Visualizing Metatranscriptome Data in ERGO

• Mapping to ERGO, BioCyc & KEGG pathways

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

January 19th 2024 at 11:00 AM (CT) / 12:00 PM (ET) / 9:00 AM (PT)

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In this webinar you will learn about:

• Latest technology to 'denoise' your amplicon sequencing samples to discover which taxa are present.

• Standard metagenome analysis tools that are integrated in ERGO such as Phyloseq, Vegan, and LEfSe.

• Utilizing Linear Discriminate Analysis (LDA) with LEfSe to identify taxa that distinguish your experimental groups.

• ERGO’s interactive visualizations such as our network diagram which identifies statistically significant biological differences.

• Principal Coordinates Analysis (PCoA), an essential technique to verify controls and expected sample groups

• Richness estimates such as Shannon, Chao1, and others that reveal the level of diversity among your sample groups

• and much more!

Thursday October 26th 2023 at 10:00 AM (CT) / 11:00 AM (ET) / 8:00 AM (PT)

Sign Up Today

About this webinar

In this webinar you will learn about:

• RNA Isolation, rRNA Depletion, QC

• Library prep & sequencing

• Read Alignment vs pseudo-alignment

• Transcriptome Analysis techniques such as

  • Clustering: Distance and Linkage choices

  • Differential Gene Analysis (DGE): DESeq2, EdgeR, Limma

  • Gene Set Enrichment Analysis (GSEA)

• Visualizing Metatranscriptome Data in ERGO

• Mapping to ERGO, BioCyc & KEGG pathways

• GAGE Analysis, Pathway enrichment

• Case Study: Applications of transcriptomics in ethanol fermentation.

Speaker Profiles

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

Thursday June 22nd 2023 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

Sign Up Today

About this webinar

In this webinar you will learn about:

• RNA Isolation, rRNA Depletion, QC

• Library prep & sequencing

• Bar coding using unique sequences

• Pooling & Sequencing

• Data Processing & Trimming

• Read Alignment vs pseudo-alignment

• Transcriptome Analysis techniques such as

  • Clustering: Distance and Linkage choices

  • Differential Gene Analysis (DGE): DESeq2, EdgeR, Limma

  • Gene Set Enrichment Analysis (GSEA)

• Transcriptome and Metatranscriptome Assembly

• Visualizing Metatranscriptome Data in ERGO

• Mapping to ERGO, BioCyc & KEGG pathways

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

Thursday May 4th 2023 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

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About this webinar

In this webinar you will learn about:

• Total gDNA isolation

• Illumina library prep & sequencing

• Oxford nanopore prep & sequencing

• Metagenome Assembly and Genome Binning

• Metagenome Assembled Genome (MAG) Extraction & Quality Assessment

• Gene Prediction and Functional Annotation

• How to Identify the taxa that contribute to functions or pathways in a metagenome

• Statistical Analysis techniques PCoA, LEfSe, Richness Estimates, and more

• Metatranscriptome Assembly

• Visualizing Metatranscriptome Data in ERGO

• Mapping to ERGO, BioCyc & KEGG pathways

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

February 2nd at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

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In this webinar you will learn about:

• Key strengths and weaknesses of using different RNA-Seq quantification tools such as kallisto, salmon, featureCounts, and others.

• Computing differential gene expression using statistical tools like Limma, DESeq2, edgeR

• Projection of expression data on KEGG pathways in ERGO

• Gene set enrichment analysis using GAGE to capture subtle metabolic shifts

• and much more!

Thursday November 3rd 2022 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

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About this webinar

In this webinar you will learn about:

• Amplicon (16S, 18S, ITS, others) Analysis Techniques

• Phylogenetic Analysis and Taxonomic Abundance

• Community Pathway & Metabolic Assessment

• Gene Prediction and Functional Annotation

• How to Identify the taxa that contribute to functions or pathways in a metagenome

• Statistical Analysis techniques PCoA, LEfSe, Richness Estimates, and more

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

Wednesday July 28th 2022 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

Sign Up Today

About this webinar

In this webinar you will learn about:

• Amplicon (16S, 18S, ITS, others) Analysis Techniques

• Metagenome Assembly and Genome Binning

• Metagenome Assembled Genome (MAG) Extraction & Quality Assessment

• Gene Prediction and Functional Annotation

• How to Identify the taxa that contribute to functions or pathways in a metagenome

• Statistical Analysis techniques PCoA, LEfSe, Richness Estimates, and more

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

Wednesday April 5th 2022 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

Sign Up Today

About this webinar

In this webinar you will learn about:

• Amplicon (16S, 18S, ITS, others) Analysis Techniques

• Metagenome Assembly and Genome Binning

• Metagenome Assembled Genome (MAG) Extraction & Quality Assessment

• Gene Prediction and Functional Annotation

• How to Identify the taxa that contribute to functions or pathways in a metagenome

• Statistical Analysis techniques PCoA, LEfSe, Richness Estimates, and more

Speaker Profile

About Igenbio

We’re here to help you from pellet to plot.  Our scientists have broad experience in both in silico and wet lab sequencing, research and development with more than 100 relevant publications in these areas. Igenbio has a proven track record of delivering scientific results for academic, governmental, and industrial institutions for two decades.

Wednesday March 9th 2022 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

January 20th 2022 at 10:00 AM (CT) / 11:00 AM (ET) / 8:00 AM (PT)

In this webinar you will learn about:

• Latest technology to 'denoise' your amplicon sequencing samples to discover which taxa are present.

• Standard metagenome analysis tools that are integrated in ERGO such as Phyloseq, Vegan, and LEfSe.

• Utilizing Linear Discriminate Analysis (LDA) with LEfSe to identify taxa that distinguish your experimental groups.

• ERGO’s interactive visualizations such as our network diagram which identifies statistically significant biological differences.

• Principal Coordinates Analysis (PCoA), an essential technique to verify controls and expected sample groups

• Richness estimates such as Shannon, Chao1, and others that reveal the level of diversity among your sample groups

• and much more!

Sign Up Today

September 16th 2021 at 10:30 AM (CT) / 11:30 AM (ET) / 8:30 AM (PT)

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In this webinar you will learn about:

• Sample Collection & Preparation

• qPCR Reactions & Cycle Thresholds

• PCR Amplification (Techniques & Pro’s & Con’s of Available Kits)

• Genome Sequencing

• Sequence Assembly Techniques

• Variant Detection & Annotation

• Lineage & VOC Assignment (Alpha, Delta, Mu, …)

Speakers

August 5th 2021 at 11:00 AM (CT) / 12:00 PM (ET) / 9:00 AM (PT)

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In this webinar you will learn about:

• Experimental Design

• The entire analysis pipeline, including:

  • Assembly

  • Gene Prediction

  • Taxonomic Prediction

  • Functional Annotation

  • Genome Binning

  • Quality Assessment

• Learn new insights by filtering taxonomy by function or pathway

• Explore each the contributions of a taxa to a pathway with key visualizations.

• Statistical Analysis including PCA, PCoA, LEfSe, Richness Estimates, and DESeq2

• and much more!

June 17th 2021 at 11:00 AM (CT) / 12:00 PM (ET) / 9:00 AM (PT)

Sign Up Today

In this webinar you will learn about:

• Key strengths and weaknesses of using different RNA-Seq quantification tools such as kallisto, salmon, featureCounts, and others.

• Computing differential gene expression using statistical tools like Limma, DESeq2, edgeR

• Projection of expression data on KEGG pathways in ERGO

• Gene set enrichment analysis using GAGE to capture subtle metabolic shifts

• and much more!